Description:
Poly(A) Polymerase catalyzes the template independent of the addition of AMP from ATP to the 3´ end of RNA. Poly(A) works more competently than E. coli for RNA oligonucleotide-labeling and poly(A) tailing. Less incubation time is required for the yeast enzyme and labels both long and short substrates well. Poly(A) preferentially labels longer RNA-molecules whereas short RNA-molecules are labeled more efficiently by T4 RNA ligase. The reaction requires Mn2+ or Mg2+, ATP as substrate, and any RNA containing 3' hydroxyl termini as a primer. Longer RNA molecules are somewhat better primers than short oligomers. Substitution of cordycepin-5'-triphosphate (3'-dATP) for ATP results in the addition of a single 3'-dA residue to the ends of the RNA, a useful technique for labeling RNA at the 3' end.
Applications:
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Labeling the 3' ends of RNA with ATP or cordycepin
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Poly(A) tailing of RNA for cloning or affinity purification
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Preparing a priming site for cDNA synthesis using oligo-dT
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Enhancing translation of RNA transferred into eukaryotic cells
Source:
An E. coli strain that carries the cloned Poly(A) Polymerase gene from (Saccharomyces cerevisiae).
Specific Activity:
>20,000U/mg
Unit Definition:
One unit is the amount of enzyme which incorporates 1 pmol AMP into acid-insoluble material at 37°C in 1 min.
Storage Buffer:
20mM Tris-HCl (pH 8.0), 50mM KCl, 0.5mM DTT, 50% glycerol.
Assay Conditions:
1X Poly(A) Polymerase Reaction Buffer, 1 mM rATP and 500 ng 5´ FAM labeled poly A 20-mer RNA in a 20 µl reaction. After incubation at 37°C for 10 min, acid insoluble radioactivity is determined either by gel electrophoresis or with an automated capillary DNA sequencer. In this assay 5 units of enzyme add approximatley 60 to 80 adenosines to the RNA primer. In these conditons 20 units of enzyme will deplete the rATP.
Heat Inactivation:
65°C for 20 minutes
Recommended Storage Condition:
-20ºC
References:
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Sippel, A. E. (1973) Eur. J. Biochem. 37, 31-40.
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Edmonds, M. (1982) in The Enzymes, 3rd edition, ed. P. D. Boyer (Academic Press, New York) 15, 217-244.
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Gething, M. J., Bye, J., Skehel, J. and Waterfield, M. (1980) Nature 287, 301-306.
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Sano, H. and Feix, G. (1976) Eur. J. Biochem. 71, 577-583.
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